Add complete EV taxid list #1793
Merged
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
maxulysse
reviewed
Nov 21, 2025
Author
There was a problem hiding this comment.
@maxulysse Not completely sure what you mean but it is downloaded straight from ncbi and ranges in descending magnitude of "number", so enterovirus parent taxid 12059 is at the end of the list. The sorting does not affect the usage in blastn.
Author
There was a problem hiding this comment.
I can add it to README if you think it would be a good addition of info!
svarona
approved these changes
Nov 24, 2025
svarona
left a comment
svarona
left a comment
There was a problem hiding this comment.
LGTM! Nice work for the EV community!
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
3 participants
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Addition of complete enterovirus taxid list.
Update of README