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1. cbg-ethz/scDEF cbg-ethz/scDEF Public

   Deep exponential families for single-cell data.

   Python 21 1

2. cbg-ethz/SCATrEx cbg-ethz/SCATrEx Public

   Map single-cell transcriptomes to copy number evolutionary trees.

   Python 13 1

3. cbg-ethz/SCICoNE cbg-ethz/SCICoNE Public

   Single-cell copy number calling and event history reconstruction.

   C++ 23 8

4. tumorevo tumorevo Public

   Simulate tumor evolution and generate bulk and single-cell data from it.

   Jupyter Notebook 6

5. wekaDeeplearning4j wekaDeeplearning4j Public

   Forked from Waikato/wekaDeeplearning4j

   Weka DL4J. Original code by Mark Hall

   Java 1

6. zinbayes zinbayes Public

   A Bayesian model for scRNA-seq data.

   Jupyter Notebook 6